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  5. Yang, Yong-Zhi†, De-Ming Gao†, Pei-Wei Sun†, Chong-Yi Ke, Qihui Fong, Min-Xin Luo, Run-Hong Gao*, Pei-Chun Liao*. 2025. Margins of adaptation at the desert frontier: Genetic responses of Ammopiptanthus mongolicus in arid northwestern China. Botanical Studies 66: 31
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  7. Luo, Min-Xin, Ming-Jen Yang, Chang-Tse Lu*, Pei-Chun Liao*. 2025. Impact of incomplete lineage sorting and natural selection on the phylogenetic and taxonomic uncertainties of Aspidistra in Taiwan. Botanical Studies 66: 35
  8. Yang, Yong-Zhi†, Pei-Wei Sun†, Chong-Yi Ke†, Min-Xin Luo, Jui-Tse Chang, Chien-Ti Chao, Run-Hong Gao*, Pei-Chun Liao*. 2025. Towards climate-resilient conservation: Integrating genetics and environmental factors in determining adaptive units of a xeric shrub. Global Ecology and Conservation 57: e03417
  9. Chang, Chih-Yi, Pei-Chun Liao, Hsy-Yu Tzeng, Junko Kusumi, Zhi-Hui Su & Yen-Hsueh Tseng*. 2025. Chromosome number variation and phylogenetic divergence of East Asian Cirsium sect. Onotrophe subsect. Nipponocirsium (Compositae), with a new species from Taiwan. Botanical Studies 66: 8
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  11. Chang, Jui-Tse†, Yu Zhang†, Elena Andronova†, Leonid V. Averyanov, Evgeniy G. Filippov, Takayuki Kawahara, Richard Shefferson, Joo-Hwan Kim, Rebecca C.-C. Hsu, Yu-Hsiu Cho, Min-Xin Luo, Pei-Chun Liao*, Yung-I Lee*. 2024. Middle Pleistocene climate change influences northward divergence and cold adaptation in an Asian lady's slipper orchid, Cypripedium macranthos Sw. (Orchidaceae). Botanical Journal of the Linnean Society 205(2): 150-160
  12. Chai, Min-Wei†, Hsin-Pei Lu†, Yi-Ting Tseng, Pei-Chun Liao*. 2024. Maintenance of species boundaries amid hybridization in two island gingers with similar ecological niches. Evolution 78(3): 526-538
  13. Yu, Chih-Chieh, Ko Mochizuki, Shuichi Nemoto, Szu-Wei Tsai, Pei-Chun Liao, Chien-Ti Chao*. 2024. Systematics of Anaphalis of Taiwan I: resurrection of A. nagsawae (Compositae: Gnaphalieae) with recognition of two varieties. Nordic Journal of Botany: e04416
  14. Sun, Pei-Wei, Jui-Tse Chang, Min-Xin Luo, Pei-Chun Liao*. 2024. Genomic insights into local adaptation and vulnerability of Quercus longinux to climate change. BMC Plant Biology 24: 279
  15. Sun, Pei-Wei, Chen Hsiao, Kurtis Jai-Chyi Pei, Yu-Hsiu Lin, Mei-Ting Chen, Po-Jen Chiang, Ling Wang, Dau-Jye Lu, Pei-Chun Liao, Yu-Ten Ju*. 2024. Unraveling the interplay between demography and landscape features in shaping connectivity and diversity: insights from the leopard cat on a subtropical island. Landscape Ecology 39: 99
  16. Li, Yi-Shao, Pei-Chun Liao, Chung-Te Chang, Shih-Ying Hwang* 2023. The contribution of epigenetics to evolutionary adaptation in Zingiber kawagoii Hayata (Zingiberaceae) endemic to Taiwan. Plants 12(7): 1558
  17. Yang, Yong-Zhi†, Jui-Tse Chang†, Hai-Xia Yan†, Run-Hong Gao†,*, Min-Xin Luo, Chien-Ti Chao, Pei-Chun Liao*. 2023. Turfgrass-dependent mycotrophic change enhances soil deterioration in dry, cold and high-alkali environments. Journal of Applied Microbiology 134(2): lxac084
  18. Chang, Jui-Tse, Koh Nakamura, Chien-Ti Chao, Min-Xin Luo, Pei-Chun Liao*. 2023. Ghost introgression facilitates genomic divergence of a sympatric cryptic lineage in Cycas revoluta. Ecology and Evolution 13: e10435
  19. He, Yi-Zhou, Pei-Chun Liao*, Yung-Ta Chang*. 2023. Enhancing patient-centred care in Taiwan's dental education system: Exploring the feasibility of doctor-patient communication education and training. Journal of Dental Sciences 18(4): 1830-1837
  20. Wu, Shu-Hong†,*, Min-Xin Luo†, Jui-Tse Chang, Ye Chen, Pei-Chun Liao*. 2023. Unravelling the dynamics of soil microbial communities under the environmental selection and range shift process in afforestation ecosystems. Science of The Total Environment 898: 165476
  21. Yu, Tao, Jian Gao*, Pei-Chun Liao, Jun-Qing Li, Wen-Bao Ma. 2022. Insights into comparative analyses and phylogenomic implications of Acer (Sapindaceae) inferred from complete chloroplast genomes. Frontiers in Genetics 12: 791628; doi: 10.3389/fgene.2021.791628
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  23. Luo, Min-Xin, Yi-Ting Tseng, Jui-Tse Chang, Chien-Ti Chao, Pei-Chun Liao*. 2022. Different roles of introgression on the demographic change in two snakebark maples, Acer caudatifolium and A. morrisonense, with contrasted postglacial expansion routes. Plants 11: 644; doi: 10.3390/plants11050644
  24. Yang, Yong-Zhi†, Min-Xin Luo†, Li-Dong Pang†, Run-Hong Gao*, Jui-Tse Chang, Pei-Chun Liao*. 2022. Parallel adaptation prompted core-periphery divergence of Ammopiptanthus mongolicus. Frontiers in Plant Science; doi: 10.3389/fpls.2022.956374
  25. Luo, Min-Xin, Hsin-Pei Lu, Bing-Hong Huang, Chia-Lung Huang, Yu-Feng Hsu*, Pei-Chun Liao*. 2022. Local adaptation and migratory habits balance spatial-genetic structure between continental and insular chestnut tiger butterflies in East Asia. Molecular Ecology 31(6): 1864-1878; doi: 10.1111/mec.16362
  26. Chang, Jui-Tse, Chien-Ti Chao, Koh Nakamura, Hsiao-Lei Liu, Min-Xin Luo, Pei-Chun Liao*. 2022. Divergence with gene flow and contrasting population size blur the species boundary in Cycas sect. Asiorientales, as inferred from morphology and RAD-seq data. Frontiers in Plant Science 13: 824158; doi: 10.3389/fpls.2022.824158
  27. Yang, Yong-Zhi†, Min-Xin Luo†, Hai-Xia Yan†, Run-Hong Gao*, Jui-Tse Chang, Chien-Ti Chao, Pei-Chun Liao*. 2022. Physicochemical and biotic changes and the phylogenetic evenness of microbial community in soil subjected to phytoreclamation. Microbial Ecology; doi: 10.1007/s00248-021-01890-w
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  29. Li, Yuejuan, Yuanye Zhang, Pei-Chun Liao, Tianrui Wang, Xuanying Wang, Saneyoshi Ueno, Fang K. Du*. 2021. Genetic, geographic, and climatic factors jointly shape leaf morphology of an alpine oak, Quercus aquifolioides Rehder & E.H. Wilson. Annals of Forest Science 78: 64; doi: 10.6084/m9.figshare.14579349
  30. Wang, Xuelin, Jinfu Liu*, Zhongsheng He*, Cong Xing, Jing Zhu, Xinguang Gu, Yiqi Lan, Zeyan Wu, Pei-Chun Liao, Dehuang Zhu. 2021. Forest gaps mediate the structure and function of the soil microbial community in a Castanopsis kawakamii forest. Ecological Indicators 122: 107288 ; doi: 10.1016/j.ecolind.2020.107288
  31. Tzeng, Tzuen-Rong J, Tzu-Yu Liu, Chiao-Wei Lin, Pei-En Chang, Pei-Xin Liao, Wen-Yuan Yang, Chih-Yuan Cheng, Pei-Chun Liao, Wen-Dee Chiang, Shih-Torng Ding, Yuan-Yu Lin*. 2021. Effects of dietary inclusion of dry Hydrastis canadensis on laying performance, egg quality, serum biochemical parameters and cecal microbiota in laying hens. Animals 11 (5): 1381; doi: 10.3390/ani11051381
  32. Chang, Jui‐Tse†, Min‐Xin Luo†, Hsin-Pei Lu, Yi-Ting Tseng, Pei-Chun Liao*, 2021. Population genetics under the Massenerhebung effect: The influence of topography on the demography of Acer morrisonense. Journal of Biogeography 48(7): 1773-1787; doi: 10.1111/jbi.14113
  33. Chao, Chien-Ti*, Chu-Chia Kuo, Jui-Tse Chang, Min-Wei Chai, Pei-Chun Liao*. 2021. Evolution of floral characters and biogeography of Heloniadeae (Melanthiaceae): an example of breeding system shifts with inflorescence change. Scientific Reports 11: 21494; doi: 10.1038/s41598-021-01049-0
  34. Luo, Min-Xin†, Hsin-Pei Lu†, Min-Wei Chai, Jui-Tse Chang, Pei-Chun Liao*, 2021. Environmental heterogeneity leads to spatial differences in genetic diversity and demographic structure of Acer caudatifolium. Plants 10(8): 1646; doi: 10.3390/plants10081646
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  37. Jiang, Hong, Ji-Jun Kong, Hsin-Chun Chen, Zhen-Yong Xiang, Wei-Ping Zhang, Zhou-Dong Han, Pei-Chun Liao, Yung-I Lee*. 2020. Cypripedium subtropicum (Orchidaceae) employs aphid colony mimicry to attract hoverfly (Syrphidae) pollinators. New Phytologist 227(4): 1213-1221; doi:10.1111/nph.16623
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  39. Yu, Tao, Bing-Hong Huang, Yuyang Zhang, Pei-Chun Liao*, Jun-Qing Li*. 2019. Chloroplast genome of an extremely endangered conifer Thuja sutchuenensis Franch.: gene organization, comparative and phylogenetic analysis. Physiology and Molecular Biology of Plants 26: 409-418. DOI :10.1007/s12298-019-00736-7
  40. Yu, Tao, Jian Gao, Bing-Hong Huang, Buddhi Dayananda, Wen-Bao Ma, Yu-Yang Zhang, Pei-Chun Liao*, Jun-Qing Li*. 2020. Comparative plastome analyses and phylogenetic applications of Acer section Platanoidea. Forests 11(4): 462; doi: 10.3390/f11040462
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  46. Lee, Yung-I, Sheng-Kun Yu, Pei-Chun Liao, Kuo-Hsiung Wang, Tsan-Piao Lin*. 2019. Newly discovered native orchids of Taiwan (XIV). Taiwania 64(4): 339-346 (SCI); doi: 10.6165/tai.2019.64.339 (SCI, IF = 0.602, Rank: 204/228, 89.47%, Category: PLANT SCIENCES)
  47. Jiang, Shan†, Min-Xin Luo†, Run-Hong Gao†,*, Wei Zhang, Yong-Zhi Yang, Ying-Jie Li, Pei-Chun Liao*. 2019. Isolation-by-environment as a driver of genetic differentiation among populations of the only broad-leaved evergreen shrub Ammopiptanthus mongolicus in Asian temperate deserts. Scientific Reports 9: 12008; doi: 10.1038/s41598-019-48472-y (SCI, IF = 4.011, Rank: 15/69, 21.74%, Category: MULTIDISCIPLINARY SCIENCES)
  48. Tseng, Yi-Ting, Min-Xin Luo, Bing-Hong Huang, Pei-Chun Liao*. 2019. Development of transferable expressed sequence tag-simple sequence repeat (EST-SSR) markers for delimitating two recently diverged gingers endemic to Taiwan. Taiwania 64(2): 209-216; doi: 10.6165/tai.2019.64.209 (SCI, IF = 0.602, Rank: 204/228, 89.47%, Category: PLANT SCIENCES)
  49. Tian, Cheng, Pei-Chun Liao, Yu-Yang Zhang, Zhengxiao Liu, Junqing Li*, Bing Yu, Qing Li, Buddhi Dayananda. 2019. Impacts of livestock grazing, topography and vegetation on distribution of wildlife in Wanglang National Nature Reserve, China. Global Ecology and Conservation 20: e00726; doi: https://doi.org/10.1016/j.gecco.2019.e00726 (SCI, IF = 2.751, Rank: 16/58, 27.59%, Category: BIODIVERSITY CONSERVATION)
  50. Chang, Jui-Tse, Bing-Hong Huang, Pei-Chun Liao*. 2019. Genetic evidence of the southward founder speciation of Cycas taitungensis from ancestral C. revoluta along the Ryukyu Archipelagos. Conservation Genetics 20(5): 1045-1056; doi: 10.1007/s10592-019-01193-1 (SCI, IF = 2.283, Rank: 23/58, 39.66%, Category: BIODIVERSITY CONSERVATION)
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  52. Wu, Shu-Hong, Bing-Hong Huang, Chia-Lung Huang, Gang Li, Pei-Chun Liao*. 2018. The aboveground vegetation type and underground soil property mediate the divergence of soil microbiomes and the biological interactions. Microbial Ecology 75(2):434-446; doi: 10.1007/s00248-017-1050-7
  53. Huang, Bing-Hong, Chun-Wen Chang, Chih Wei Huang, Jian Gao and Pei-Chun Liao*. 2018. Composition and functional specialists of the gut microbiota of frogs reflect habitat differences and agricultural activity. Frontiers in Microbiology 8: 2670; doi: 10.3389/fmicb.2017.02670
  54. Yang, Chih-Kai, Yu-Chung Chiang, Bing-Hong Huang, Li-Ping Ju, Pei-Chun Liao*. 2018. Nuclear and chloroplast DNA phylogeography suggests an Early Miocene southward expansion of Lithocarpus (Fagaceae) on the Asian continent and islands. Botanical Studies 59: 27; doi: 10.1186/s40529-018-0244-8
  55. Yang, Chih-Kai, Bing-Hong Huang, Shao-Wei Ho, Meng-Yuan Huang, Jenn-Che Wang, Jian Gao, Pei-Chun Liao*. 2018. Molecular genetic and biochemical evidence for adaptive evolution of leaf abaxial epicuticular wax crystals in the genus Lithocarpus (Fagaceae). BMC Plant Biology 18: 196; doi: 10.1186/s12870-018-1420-4
  56. Chiang, Yu-Chung, Bing-Hong Huang, Nan Li, Yi-Qing Gong, Hsien-Hui Shen, Shong Huang, Pei-Chun Liao*. 2018. Multilocus genome evidence for a paraphyletic relationship and past interspecific gene flow between species of Cycas Section Asiorientales. Memoirs of the New York Botanical Garden 117: 230-249; doi: http://dx.doi.org/10.21135/893275389.017
  57. Guo, Wuxia, Ying Liu, Wei Lun Ng, Pei-Chun Liao, Bing-Hong Huang, Weixi Li, Chunmei Li,Xianggang Shi, Yelin Huang*. 2018. Comparative transcriptome analysis of the invasive weed Mikania micrantha with its native congeners provides insights into genetic basis underlying successful invasion. BMC Genomics 19:392; doi: 10.1186/s12864-018-4784-9
  58. Huang, Bing-Hong, Yuan-Chien Lin, Chih-Wei Huang, Hsin-Pei Lu, Min-Xin Luo, Pei-Chun Liao*. 2018. Differential genetic responses to the stress revealed the mutation-order adaptive divergence between two sympatric ginger species. BMC Genomics 19: 692; doi: 10.1186/s12864-018-5081-3
  59. Liao, Pei-Chun, Li-Ping Ju, Ya-Zhu Ko, Mei-Hui Chen, Yu-Pin Cheng, Yu-Chung Chiang*. 2014. Using the genetic variation of Cycas taitungensis, an endangered island cycad, to evaluate ex situ conservation strategies. Memoirs of the New York Botanical Garden 117: 205-229
  60. Huang, Bing-Hong, Chih-Wei Huang, Chia-Lung Huang, Pei-Chun Liao*. 2017. Continuation of the genetic divergence of ecological speciation by spatial environmental heterogeneity in island endemic plants. Scientific Reports 7: 5465; doi: 10.1038/s41598-017-05900-1
  61. Chen, Jui-Hung, Chun-Lin Huang, Yu-Long Lai, Chung-Te Chang, Pei-Chun Liao, Shih-Ying Hwang*. Chih-Wen Sun*. 2017. Postglacial range expansion and the role of ecological factors in driving adaptive evolution of Musa basjoo var. formosana. Scientific Reports 7: 5341; doi: 10.1038/s41598-017-05256-6
  62. Tsai, Chi-Chu†, Yu-Jen Wu†, Chiou-Rong Sheue†, Pei-Chun Liao†, Ying-Hao Chen, Shu-Ju Li, Jian-Wei Liu, Han-Tsung Chang, Wen-Lin Liu, Ya-Zhu Ko, Yu-Chung Chiang*. 2017. Molecular basis underlying leaf variegation of a moth orchid mutant (Phalaenopsis aphrodite subsp. formosana). Frontiers in Plant Science 8:1333; doi: 10.3389/fpls.2017.01333
  63. Hsiung, Huan-Yi, Bing-Hong Huang, Jui-Tse Chang, Yao-Moan Huang, Chih-Wei Huang, Pei-Chun Liao*. 2017. Local climate heterogeneity shapes population genetic structure of two undifferentiated insular Scutellaria species. Frontiers in Plant Science 8:159; doi: 10.3389/fpls.2017.00159
  64. Ko, Ya-Zhu, Huei-Chuan Shih, Chi-Chu Tsai, Hsing-Hua Ho, Pei-Chun Liao*, Yu-Chung Chiang* 2017. Screening transferable microsatellite markers across Genus Phalaenopsis (Orchidaceae). Botanical Studies 58:48; doi: 10.1186/s40529-017-0200-z
  65. Gao, Jian, Bing-Hong Huang, Yu-Ting Wan, JenYu Chang, Jun-Qing Li, Pei-Chun Liao*. 2017. Functional divergence and intron variability during evolution of angiosperm TERMINAL FLOWER1 (TFL1) genes. Scientific Reports 7: 14830; doi:10.1038/s41598-017-13645-0
  66. Gao, Jian, Pei-Chun Liao*, Wan-Heng Meng, Fang K. Du, Jun-Qing Li*. 2017. Application of DNA barcodes for testing hypotheses on the role of trait conservatism and adaptive plasticity in Acer L. section Palmata Pax (Sapindaceae). Brazilian Journal of Botany 40(4): 993-1005; doi: 10.1007/s40415-017-0404-1
  67. Chang, Chun-Wen, Bing-Hong Huang, Si-Min Lin, Chia-Lung Huang, Pei-Chun Liao*. 2016. Changes of diet and dominant intestinal microbes in farmland frogs. BMC Microbiology 16: 33; doi: 10.1186/s12866-016-0660-4
  68. Huang, Bing-Hong, Yi-Wen Chen, Chia-Lung Huang, Jian Gao, Pei-Chun Liao*. 2016. Diversifying selection of the anthocyanin biosynthetic downstream gene UFGT accelerates floral diversity of island Scutellaria species. BMC Evolutionary Biology 16:191; doi: 10.1186/s12862-016-0759-0
  69. Huang, Chun-Lin, Jui-Hung Chen, Chung-Te Chang, Jeng-Der Chung, Pei-Chun Liao, Jenn-Che Wang, Shih-Ying Hwang*. 2016. Disentangling the effects of isolation-by-distance and isolation-by-environment on genetic differentiation among Rhododendron lineages in the subgenus Tsutsusi. Tree Genetics & Genomes 12:53
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  71. Liao, Pei-Chun, Kung-Kai Wang, Shinn-Shyong Tsai, Hung-Jen Liu, Bing-Hong Huang, Kuo-Pin Chuang*. 2015. Recurrent positive selection and heterogeneous codon usage bias events leading to coexistence of divergent pigeon circoviruses in Taiwan. Journal of General Virology 96(8): 2262-2273
  72. Huang, Bing-Hong, Yu Ruan, Jun-Qing Li, Pei-Chun Liao*. 2015. Applying effective population size estimates of Kandelia obovata Sheue, Liu & Yong to conservation and restoration management. Forests 6: 1439-1453
  73. Yang, Yong-Qiong, Bing-Hong Huang, Zhi-Xiang Yu, Pei-Chun Liao*. 2015. Inferences of demographic history and fine-scale landscape genetics in Cycas panzhihuaensis and implications for its conservation. Tree Genetics & Genomes 11:78
  74. Shen, Sin Ying, Wei Chun Chang, Hsiang Heng Yi, Shinn-Shong Tsai, Hung Jen Liu, Pei-Chun Liao, Kuo Pin Chuang. 2015. Development of a subunit vaccine containing recombinant chicken anemia virus VP1 and pigeon IFN-γ. Veterinary Immunology and Immunopathology 167(3-4) 200-204
  75. Huang, Bing-Hong, Pei-Chun Liao*. 2015. Tracing evolutionary relicts of positive selection on eight malaria-related immune genes in mammals. Innate Immunity (in press)
  76. Huang, Bing-Hong, Erli Pang, Yi-Wen Chen, Huifen Cao, Yu Ruan, Pei-Chun Liao*. 2015. Positive selection and functional divergence of R2R3-MYB paralogous genes expressed in inflorescence buds of Scutellaria species (Labiatae). International Journal of Molecular Sciences 16(3): 5900-5921
  77. Ruan, Yu, Bing-Hong Huang, Shih-Jie Lai, Yu-Ting Wan, Jun-Qing Li, Shong Huang, Pei-Chun Liao*. 2013. Population genetic structure, local adaptation, and conservation genetics of Kandelia obovata. Tree Genetics & Genomes 9(4): 913-925
  78. Chiang, Yu-Chung, Bing-Hong Huang, Chun-Wen Chang, Yu-Ting Wan, Shih-Jie Lai, Shong Huang, Pei-Chun Liao*. 2013. Asymmetric introgression in the horticultural living fossil Cycas Sect. Asiorientales using a genome-wide scanning approach. International Journal of Molecular Sciences 14(4): 8228-8251
  79. Chiang, Yu-Chung, Bing-Hong Huang, Huei-Chuan Shih, Tsai-Wen Hsu, Chun-Wen Chang, Pei-Chun Liao*. 2012. Characterization of 24 transferable microsatellite loci in four skullcaps (Scutellaria, Labiatae). American Journal of Botany 99(1): e24-e27
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  83. Liao, Pei-Chun, Kuan-Hung Lin, Chin-Ling Ko, Shih-Ying Hwang*. 2011. Molecular evolution of a family of resistance gene analogs of nucleotide-binding site sequences in Solanum lycopersicum. Genetica 139(10): 1229-1240
  84. Liao, Pei-Chun, Shih-Ying Hwang, Shong Huang, Yu-Chung Chiang*, Jenn-Che Wang*. 2011. Contrasting demographic patterns of Ceriops tagal (Rhizophoraceae) populations in the South China Sea. Australian Journal of Botany 59(6): 523-532
  85. Liao, Pei-Chun, Tsan-Piao Lin, Shih-Ying Hwang*. 2010. Reexamination of the pattern of geographical disjunction of Chamaecyparis (Cupressaceae) in North America and East Asia. Botanical Studies 51: 511-520
  86. Liao, Pei-Chun, Dai-Chang Kuo, Chia-Chia Lin, Kuo-Chieh Ho, Tsan-Piao Lin*, Shih-Ying Hwang*. 2010. Historical spatial range expansion and a very recent bottleneck of Cinnamomum kanehirae Hay. (Lauraceae) in Taiwan inferred from nuclear genes. BMC Evolutionary Biology 10: 124
  87. Liao, Pei-Chun, Tsan-Piao Lin, Wei-Chieh Lan, Jeng-Der Chung, Shih-Ying Hwang*. 2010. Duplication of the class I cytosolic small heat shock protein gene and potential functional divergence revealed by sequence variations flanking the α-crystallin domain in the genus Rhododendron (Ericaceae). Annals of Botany 105(1): 57-69
  88. Liao, Pei-Chun, Huei-Chuan Shih, Tsair-Bor Yen, Sheng-You Lu, Yu-Pin Cheng*, Yu-Chung Chiang*. 2010. Molecular evaluation of interspecific hybrids between Acer albopurpurascens and A. buergerianum var. formosanum. Botanical Studies 51: 413-420
  89. Liao, Pei-Chun, Yu-Chung Chiang*, Jenn-Che Wang*, Shong Huang. 2009. Gene flow of Ceriops tagal (Rhizophoraceae) across the Kra Isthmus in the Thai Malay Peninsula. Botanical Studies 50(2): 193-204
  90. Liao, Pei-Chun, Xun Gong, Huei-Chuan Shih, Yu-Chung Chiang*. 2009. Isolation and characterization of eleven polymorphic microsatellite loci from a rare species Piper polysyphonum (Piperaceae). Conservation Genetics 10(6): 1911-1914
  91. 蔡麗琴、廖培鈞、謝幸媚、李俊億、王震哲*. 2007. 以葉綠體基因組之非密碼區及核核糖體DNA之序列探討台灣地區鬼針草(Bidens pilosa L.)之遺傳多樣性. 生物學報42(2): 89-98.
  92. Liao, Pei-Chun, Bing-Hong Huang, Shong Huang*. 2007. Microbial community composition of the Danshui River estuary of northern Taiwan and the practicality of the phylogenetic method in microbial barcoding. Microbial Ecology 54(3): 497-507
  93. Liao, Pei-Chun, Sonjai Havanond, Shong Huang*. 2007. Phylogeography of Ceriops tagal (Rhizophoraceae) in Southeast Asia: the land barrier of the Malay Peninsula has caused population differentiation between the Indian Ocean and South China Sea. Conservation Genetics 8(1): 89-98

  1. Liao, Pei-Chun*. Disentangling the climatic effect on genetic compositions of Scutellaria species in Taiwan. 2016 TSPB Annual Conference & Symposium: Climate Change: Evolutionary Strategies in Plants. National Chung Hsing University, Taichung, Taiwan. Nov. 26-27, 2016.
  2. 何紹瑋、廖培鈞*。以遺傳分析比較石櫟屬物種間葉表蠟相關生合成基因之演化 (Evolution of leaf epicuticular wax in stone oaks (Lithocarpus, Fagaceae): genetic analyses of wax-biosynthetic genes)。2016臺大師大生態演化學術聯合發表會暨壁報展。國立台灣師範大學，台北。 May 22, 2016.
  3. 黃秉宏、楊永瓊、余志祥、廖培鈞*。攀枝花蘇鐵的地景遺傳學分析與保育政策應用 (Inferences of fine-scale landscape genetics in Cycas panzhihuaensis and implications for its conservation)。2016臺大師大生態演化學術聯合發表會暨壁報展。國立台灣師範大學，台北。 May 22, 2016. (Excellent Poster Award)
  4. 黃秉宏、楊永瓊、余志祥、廖培鈞*。攀枝花蘇鐵的地景遺傳學分析與保育政策影響 (Inferences of fine-scale landscape genetics in Cycas panzhihuaensis and implications for its conservation)。2016台灣植物分類學會年會暨植物多樣性與系統分類研討會。國立台灣師範大學，台北。 Mar. 5, 2016.
  5. Huang, Bing-Hong, Pei-Chun Liao*. Positive selection and functional divergence of anthocyanin biosynthetic genes expressed in inflorescence buds of Scutellaria species (Labiatae). 第八屆海峽兩岸生命科學與技術發展論壇, 北京師範大學, 北京. Aug. 21-22, 2015. (Oral presentation by Mr. Bing-Hong Huang)
  6. Ho, Shao-Wei, Chih-Kai Yang, Pei-Chun Liao*. Evolution of epicuticular wax biosynthesis-related genes in stone oaks (Lithocarpus, Fagaceae). The Joint 2015 Forum of Biotechnology, Medicine, Ecology and Evolution And the 12th Symposium of the Frontiers of Biomedical Sciences, Taipei, Taiwan. May 29-30, 2015. (Poster)
  7. Huang, Bing-Hong, Pei-Chun Liao*. Tracing evolutionary relicts of positive selection on eight malaria-related immune genes in mammals. The Joint 2015 Forum of Biotechnology, Medicine, Ecology and Evolution And the 12th Symposium of the Frontiers of Biomedical Sciences, Taipei, Taiwan. May 29-30, 2015. (Poster & Oral presentation by Mr. Bing-Hong Huang)
  8. Chen, Yi-Wen, Bing-Hong Huang, Erli Pang, Huifen Cao, Yu Ruan, Pei-Chun Liao*. Positive selection and functional divergence of R2R3-MYB paralogous genes expressed in inflorescence buds of Scutellaria species (Labiatae). The Joint 2015 Forum of Biotechnology, Medicine, Ecology and Evolution And the 12th Symposium of the Frontiers of Biomedical Sciences, Taipei, Taiwan. May 29-30, 2015. (Poster)
  9. Yu-Chung Chiang, Bing-Hong Huang, Li-Ping Ju, Chih-Kai Yang, Pei-Chun Liao*. Southward expansion and northward returns of Asian stone oaks in response to the Miocene climate changes. 2014 Plant Science Annual Meeting & Symposium: Innovation and Translational Technologies in Plant Science, Academia Sinica, Taipei. Dec. 13-14, 2014. (Oral Presentation)
  10. Ya-Zhu Ko, Pei-Chun Liao, Mei-Hui Chen, Yu-Chung Chiang*. Evaluation the conservation strategies for endangered species based on population genetics. 2014 Plant Science Annual Meeting & Symposium: Innovation and Translational Technologies in Plant Science, Academia Sinica, Taipei. Dec. 13-14, 2014. (Oral Presentation by Prof. YC Chiang)
  11. Zhi-Xiang Yu, Shong Huang, Pei-Chun Liao*, Bing-Hong Huang*. Introgression in the Cycas panzhihuaensis using AFLP genome-wide approach. The Sixth National Cycas Symposium, Panzhihua City, Sichuan, China. Oct. 28-31, 2014. (Oral presentation by Mr. Bing-Hong Huang)
  12. Bing-Hong Huang, Pei-Chun Liao*. Speciation and introgression of Taiwanese skullcaps (Scutellaria, Lamiaceae) assessed by multilocus genome markers. International Plant Evolutionary Genetics Symposium. National Taiwan Normal University, Taipei. Oct. 2014. (Oral presentation by Mr. Bing-Hong Huang)
  13. 廖培鈞*。亞洲石櫟屬植物的南渡北遷(Nuclear and chloroplast DNA phylogeography states the Early Miocene southward expansion and Middle-Late Miocene northward returns of Lithocarpus(Fagaceae) in Asian continent and islands)。2014問題解決導向演化與生態學研習營(Workshop on problem solving oriented evolutionary and ecological research)。特有生物研究保育中心，集集，南投。29-31, July, 2014. (Oral presentation)
  14. 何紹瑋、廖培鈞*。石櫟屬(殼斗科)蠟相關生合成基因之演化。台大師大生態演化聯合學術發表暨壁報展。國立台灣師範大學，台北。24, May, 2014. (Oral presentation by 何紹瑋)
  15. Huang, Bing-Hong, Yu-Chung Chiang, Li-Ping Ju, Chih-Kai Yang, Pei-Chun Liao*. Phylogeography of tropical stone oaks (Lithocarpus) in Southeast Asia. 2014 Annual Conference of TSPS & Symposium on Plant Biodiversity and Systematics, National Taiwan Normal University, Taipei, Taiwan. 15, Mar. 2014. (Oral presentation by Mr. Bing-Hong Huang)
  16. 高健、黃秉宏、李俊清、廖培鈞*。槭屬植物的生物地理學研究 (Biogeographic study of Acer)。2014台灣植物分類學會年會暨植物多樣性與系統分類研討會。國立台灣師範大學，台北。15, Mar. 2014. (Poster)
  17. Chen, Yi-Wen, Bing-Hong Huang, Pei-Chun Liao*. SNPs discovery of anthocyanin biosynthetic pathway genes in the inflorescence transcriptome in Scutellaria (Labiatae). 2013 Annual Conference of TSPS & Symposium on Plant Biodiversity and Systematics, National Taiwan Normal University, Taipei, Taiwan. 9, Mar. 2013. (Poster)
  18. 霍凱婷、Yoshi Kawamoto、廖培鈞、蘇秀慧。恆春半島台灣獼猴(Macaca cyclopis)族群遺傳結構初探。2013年動物行為暨生態學研討會。國立東華大學，花蓮。Jan. 25-26, 2013. (Poster)
  19. 張俊文、廖培鈞、林思民*。農田與自然環境下澤蛙(Fejervarya limnocharis)的繁殖棲地選擇。2013年動物行為暨生態學研討會。國立東華大學，花蓮。Jan. 25-26, 2013. (Poster)

名稱 開始日期 結束日期 委託單位 編號 參與身份別
葉背顏色的適應演化： 白背櫟複合群(殼斗科)葉背蠟相關基因的區域適應與親緣訊號 2025/08/01 2026/07/31 國科會 NSTC 112-2621-B-003 -001-MY3 主持人
葉背顏色的適應演化： 白背櫟複合群(殼斗科)葉背蠟相關基因的區域適應與親緣訊號 2024/08/01 2025/07/31 國科會 NSTC 112-2621-B-003 -001-MY3 主持人
葉背顏色的適應演化： 白背櫟複合群(殼斗科)葉背蠟相關基因的區域適應與親緣訊號 2023/08/01 2024/07/31 國科會 NSTC 112-2621-B-003 -001-MY3 主持人
冰期避難所與空間-環境異質性對台灣低海拔三奈族群遺傳結構的影響 2022/08/01 2023/07/31 科技部(原國科會) MOST 109-2621-B-003 -003 -MY3 主持人
冰期避難所與空間-環境異質性對台灣低海拔三奈族群遺傳結構的影響 2021/08/01 2022/07/31 科技部(原國科會) MOST 109-2621-B-003 -003 -MY3 主持人
親緣限制與環境變因對大陸及島嶼石櫟屬植物的物候及性狀分化的影響(3/3) 2021/08/01 2022/07/31 科技部(原國科會) MOST 110-2628-B-003 -001 主持人
親緣限制與環境變因對大陸及島嶼石櫟屬植物的物候及性狀分化的影響(2/3) 2020/08/01 2021/07/31 科技部(原國科會) MOST 109-2628-B-003 -001 主持人
冰期避難所與空間-環境異質性對台灣低海拔三奈族群遺傳結構的影響 2020/08/01 2021/07/31 科技部(原國科會) MOST 109-2621-B-003 -003 -MY3 主持人
親緣限制與環境變因對大陸及島嶼石櫟屬植物的物候及性狀分化的影響(1/3) 2019/08/01 2020/07/31 科技部(原國科會) MOST 108-2628-B-003-001 主持人
植物葉表特徵的適應性演化：以石櫟屬植物葉表蠟結晶的遺傳與生理生態研究為例 2018/08/01 2019/07/31 科技部(原國科會) MOST 105-2628-B-003-002-MY3 主持人
以尖葉楓與紅榨楓自然雜交的遺傳檢測探討不同海拔植物的適應性基因漸滲與棲地擴張 2018/08/01 2019/07/31 科技部(原國科會) MOST 105-2628-B-003-001-MY3 主持人
以尖葉楓與紅榨楓自然雜交的遺傳檢測探討不同海拔植物的適應性基因漸滲與棲地擴張 2017/08/01 2018/07/31 科技部(原國科會) MOST 105-2628-B-003-001-MY3 主持人
植物葉表特徵的適應性演化：以石櫟屬植物葉表蠟結晶的遺傳與生理生態研究為例 2017/08/01 2018/07/31 科技部(原國科會) MOST 105-2628-B-003-002-MY3 主持人
植物葉表特徵的適應性演化：以石櫟屬植物葉表蠟結晶的遺傳與生理生態研究為例 2016/08/01 2017/07/31 科技部(原國科會) MOST 105-2628-B-003-002-MY3 主持人
以尖葉楓與紅榨楓自然雜交的遺傳檢測探討不同海拔植物的適應性基因漸滲與棲地擴張 2016/08/01 2017/07/31 科技部(原國科會) MOST 105-2628-B-003-001-MY3 主持人
以生態基因組探討快速分化的黃芩(Scutellaria)的適應性演化 2015/08/01 2016/07/31 科技部(原國科會) NSC102-2621-B-003-005-MY3 主持人
以生態基因組探討快速分化的黃芩(Scutellaria)的適應性演化 2014/08/01 2015/07/31 科技部(原國科會) NSC102-2621-B-003-005-MY3 主持人
台灣與俄羅斯原生喜普鞋蘭之親緣地理學研究 2014/01/01 2016/12/31 科技部(原國科會) MOST 103-2923-B-178-001-MY3 協同/共同主持人
以生態基因組探討快速分化的黃芩(Scutellaria)的適應性演化 2013/08/01 2014/07/31 科技部(原國科會) NSC102-2621-B-003-005-MY3 主持人
樟科新木薑子屬與殼斗科柯屬植物多樣性速率變化研究 2012/08/01 2013/07/31 科技部(原國科會) NSC99-2621-B-020-002-MY3 主持人
台東蘇鐵種苗之分子鑑定及基因漸滲檢測 2011/11/09 2011/12/31 其他政府部門 100農科-1.1.8-務-e1 主持人
台東蘇鐵保育遺傳學研究：族群遺傳結構、族群大小變化及境外栽種植株來源鑑定 2011/11/09 2012/10/31 其他政府部門 100林發-7.1-保-88 主持人
樟科新木薑子屬與殼斗科柯屬植物多樣性速率變化研究 2011/08/01 2012/07/31 科技部(原國科會) NSC99-2621-B-020-002-MY3 主持人
南台灣特稀有植物之遺傳保存及遺傳多樣性調查─黃芩屬特有種植物案例 2010/11/01 2011/04/30 其他政府部門 99農科-1.1.8-務-e1 主持人
樟科新木薑子屬與殼斗科柯屬植物多樣性速率變化研究 2010/08/01 2011/07/31 科技部(原國科會) NSC99-2621-B-020-002-MY3 主持人
台灣黃芩屬植物之種化模式研究 2010/01/01 2010/07/31 科技部(原國科會) NSC99-2621-B-020-001- 主持人

  1. 廖培鈞, 黃生 2013. 第十二章：華萊士線的餘敘─看不見的第七條線。In: 華萊士─一個科學與人文的先行者 (主編：陸聲山)。國立臺灣博物館出版。Pp. 275-297. (ISBN：978-986-03-8476-5)